The gene structure and other genome annotation in MalariaMine are provided by
a variety of curated source databases. In most cases MalariaMine includes
all genome features that have chromosomal locations.
Return all genes within a specified chromosomal interval in a given species
Return all genes of a particular transcript type from a given species
Return all of the non-coding genes, and their transcripts, for a particular species
Return all transcripts, and their positions, from a particular species
Return all CDSs for a particular transcript
Return a list of transcripts in a defined size range
For a given CDS, return the CDS chromosomal location, the gene that the CDS belongs to and the protein that it makes along with the length of the protein in amino-acids
Return the chromosomal position of a particular transcript
Return the chromosomal positions of all transcripts on a particular chromosome
Return all proteins for a particular gene
Return a list of human orthologs (as predicted by Panther) from an input gene or list of genes
These links will take you to the Query Builder pages which allow you to make new queries and create template queries of your own
Transcript,
Gene,
Chromosome,
GOTerm,
ChromosomeBand,
SnoRNA,
UTR,
NcRNA,
TFBindingSite,
MRNA