WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00031307 Gene Name  CBG09784
Sequence Name  ? CBG09784 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: PAN/Apple domain and PAN domain. Is an ortholog of C. elegans C34C12.7. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG09784a.1 CBG09784a.1   [unknown]
Transcript:CBG09784a.2 CBG09784a.2   [unknown]
Transcript:CBG09784b.1 CBG09784b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG09784b CBG09784b   [unknown]
CDS:CBG09784a CBG09784a   [unknown]

0 RNAi Result

7 Allele

Public Name
WBVar00137125
WBVar00115248
WBVar00115244
WBVar00115245
WBVar00115246
WBVar00115247
WBVar00115243

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG09784, AACGATAATGACATTGGAAACAGATCACACTGGGATGGCGGTTGAACCATGGCGCAATAT, WBGene00031307   Expr1052431 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term