WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00029981 Gene Name  Cbr-aex-3
Sequence Name  ? CBG08121 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: DENN domain, C-terminal lobe; dDENN domain; cDENN domain; uDENN domain; MAP kinase-activating death domain protein; and DENN (AEX-3) domain. Is an ortholog of C. elegans aex-3. In C. elegans, aex-3 is involved in several processes, including egg-laying behavior; mating; and positive regulation of digestive system process. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG08121b.2 CBG08121b.2   [unknown]
Transcript:CBG08121b.1 CBG08121b.1   [unknown]
Transcript:CBG08121a.1 CBG08121a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG08121a CBG08121a   [unknown]
CDS:CBG08121b CBG08121b   [unknown]

0 RNAi Result

2 Allele

Public Name
WBVar00136815
WBVar00136816

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-aex-3, CCACCGAGCGATGGTGGTACGAACGTCTTGTGAATATCACATACTCTCCGAAAACAAAAA, WBGene00029981   Expr1063816 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term