WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00029564 Gene Name  CBG07566
Sequence Name  ? CBG07566 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. Is an ortholog of C. elegans F54E4.4. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG07566.1 CBG07566.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG07566 CBG07566   [unknown]

0 RNAi Result

10 Allele

Public Name
WBVar00136721
WBVar00136720
WBVar00136723
WBVar00136722
WBVar00136714
WBVar00136716
WBVar00136715
WBVar00136718
WBVar00136717
WBVar00136719

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG07566, ATGAGACCAAATTGTCAAAAAGCTTGCAACTCTTGTGGAGAGCTGGTTGGGACTGTGTAT, WBGene00029564   Expr1053354 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term