WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00028613 Gene Name  Cbr-ketn-1
Sequence Name  ? CBG06318 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Immunoglobulin I-set domain; Immunoglobulin I-set; Immunoglobulin subtype; Immunoglobulin-like fold; Immunoglobulin subtype 2; and Immunoglobulin-like domain superfamily. Is an ortholog of C. elegans ketn-1. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG06318.1 CBG06318.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG06318 CBG06318   [unknown]

0 RNAi Result

6 Allele

Public Name
WBVar00136484
WBVar00136486
WBVar00136485
WBVar00136488
WBVar00136487
WBVar00136489

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG27341, CATTATCGAAAAAATCAACCAATCAAAAAATCGATACCATGGAAACGAGTAGTTTTTTAA, WBGene00088755   Expr1070241 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cbr-ketn-1, AAGTTTAGCGCCGAAGTTGATGGAAATCCAGAGCCAAGTGTCATCTGGCAGTTCAAGGGA, WBGene00028613   Expr1065835 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term