WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00039160 Gene Name  Cbr-srm-2
Sequence Name  ? CBG20083 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: 7TM GPCR, serpentine receptor class r (Str) and Serpentine type 7TM GPCR chemoreceptor Str. Is an ortholog of C. elegans srm-2. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG20083.1 CBG20083.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG20083 CBG20083   [unknown]

0 RNAi Result

7 Allele

Public Name
WBVar00139128
WBVar00139129
WBVar00139130
WBVar00008839
WBVar00128160
WBVar00128159
WBVar00128158

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-srm-2, AAAACTCATTTTTGTCAACTAATTTGCCATTTTTGTTCTCTTGGTGCCCGGCGATCAATC, WBGene00039160   Expr1060687 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term