WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00038719 Gene Name  Cbr-btb-16.1
Sequence Name  ? CBG19516 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily and BTB/POZ domain. Is an ortholog of C. elegans btb-16. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG19516b.1 CBG19516b.1   [unknown]
Transcript:CBG19516a.1 CBG19516a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG19516a CBG19516a   [unknown]
CDS:CBG19516b CBG19516b   [unknown]

0 RNAi Result

8 Allele

Public Name
WBVar00138988
WBVar00138989
WBVar00138986
WBVar00138987
WBVar00138991
WBVar00138992
WBVar00138990
WBVar00138993

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-btb-20, CAAATGAAAGAAATCGAAATCAAAGAAGTTTCCTATGAAGATTTCGGACTTCTTCTCTCT, WBGene00038719   Expr1062966 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term