WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00037943 Gene Name  CBG18546
Sequence Name  ? CBG18546 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domain: Cystine-knot cytokine. Is an ortholog of C. elegans Y95B8A.6. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG18546b.1 CBG18546b.1   [unknown]
Transcript:CBG18546a.1 CBG18546a.1   [unknown]
Transcript:CBG18546a.2 CBG18546a.2   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG18546b CBG18546b   [unknown]
CDS:CBG18546a CBG18546a   [unknown]

0 RNAi Result

3 Allele

Public Name
WBVar00138800
WBVar00138798
WBVar00138799

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG18546, GTCATCAATGAGCTCATTTGTTCACAGAAGGCGTGTCTGCGCGGCGAGGGAAAGTGCATT, WBGene00037943   Expr1062723 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term