WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00040284 Gene Name  Cbr-anoh-2
Sequence Name  ? CBG21547 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Anoctamin and Calcium-activated chloride channel. Is an ortholog of C. elegans anoh-2. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG21547a.1 CBG21547a.1   [unknown]
Transcript:CBG21547b.1 CBG21547b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG21547a CBG21547a   [unknown]
CDS:CBG21547b CBG21547b   [unknown]

0 RNAi Result

17 Allele

Public Name
WBVar00031642
WBVar00031612
WBVar00031582
WBVar00031647
WBVar00031617
WBVar00031587
WBVar00031652
WBVar00031622
WBVar00031592
WBVar00031657
WBVar00031627
WBVar00031597
WBVar00031632
WBVar00031602
WBVar00031637
WBVar00031607
WBVar00031577

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG21545, ATTATACAGGATGGAATAGTAGAAGGACAACGATTTGCGTTGAGTTCGGATTTATGGAGG, WBGene00040283   Expr1069942 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG21548, GTGAATCCCGTCTCCTCTCCCACACGCAAACTCCATCATCCGATCAACAAAACAATCAAC, WBGene00040285   Expr1050166 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG21547, AATCTATCTGGAATGGTGGAAACGAGTTCAAGCGGAATTGGCGTTCAAATGGGGGACATA, WBGene00040284   Expr1068281 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term