WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00040634 Gene Name  Cbr-mth-2
Sequence Name  ? CBG21976 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domain: GPS motif. Is an ortholog of C. elegans mth-2. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG21976b.1 CBG21976b.1   [unknown]
Transcript:CBG21976a.1 CBG21976a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG21976b CBG21976b   [unknown]
CDS:CBG21976a CBG21976a   [unknown]

0 RNAi Result

15 Allele

Public Name
WBVar00130851
WBVar00130850
WBVar00130853
WBVar00130852
WBVar00130855
WBVar00130854
WBVar00130857
WBVar00130856
WBVar00130859
WBVar00130858
WBVar00130861
WBVar00130860
WBVar00130863
WBVar00130862
WBVar00130864

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG21976, AAGGAACGATTCTATTTTTGATTTTCCTCTACAAACGATATCGAGCTTGGCAATCGGAGA, WBGene00040634   Expr1057733 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term