WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00040592 Gene Name  Cbr-unc-14
Sequence Name  ? CBG21923 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: RUN domain and RUN domain superfamily. Is an ortholog of C. elegans unc-14. In C. elegans, unc-14 is involved in regulation of protein localization and synaptic vesicle localization. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG21923b.1 CBG21923b.1   [unknown]
Transcript:CBG21923a.1 CBG21923a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG21923b CBG21923b   [unknown]
CDS:CBG21923a CBG21923a   [unknown]

0 RNAi Result

8 Allele

Public Name
WBVar00130751
WBVar00130750
WBVar00032797
WBVar00130747
WBVar00130746
WBVar00032792
WBVar00130749
WBVar00130748

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-unc-14, CAGATGCGTTCGATTGATCACTTCGAGCAGTCAAATCAATAATGGAGTGATCCCAATTGA, WBGene00040592   Expr1060299 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term