WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00042688 Gene Name  Cbr-cnk-1
Sequence Name  ? CBG24619 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Pleckstrin homology domain; Sterile alpha motif domain; CRIC domain; PDZ domain; PH domain; Sterile alpha motif/pointed domain superfamily; SAM domain (Sterile alpha motif); Connector enhancer of kinase suppressor of ras; PDZ superfamily; and PH-like domain superfamily. Is an ortholog of C. elegans cnk-1. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG24619a.1 CBG24619a.1   [unknown]
Transcript:CBG24619b.2 CBG24619b.2   [unknown]
Transcript:CBG24619b.1 CBG24619b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG24619a CBG24619a   [unknown]
CDS:CBG24619b CBG24619b   [unknown]

0 RNAi Result

1 Allele

Public Name
WBVar00036054

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-cnk-1, AAATTTGGTTGTGTTTACGGGGTCACTACCTACTTCTCTGTTCGAATCAATATGTGAAAA, WBGene00042688   Expr1052776 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term