WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00023541 Gene Name  CBG00031
Sequence Name  ? CBG00031 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: OST3 / OST6 family, transporter family; Oligosaccharyl transferase complex, subunit OST3/OST6; and Thioredoxin-like superfamily. Is an ortholog of C. elegans ZK686.3. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG00031.1 CBG00031.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG00031 CBG00031   [unknown]

0 RNAi Result

6 Allele

Public Name
WBVar00038744
WBVar00058884
WBVar00058889
WBVar00058894
WBVar00058874
WBVar00058879

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG00031, ATTCATGATCACCAATCCAAACACCAAGGAGCCATCGTTCATCCATGGATCCACACAATT, WBGene00023541   Expr1051477 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term