WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Phenotype : WBPhenotype:0001355 gonad morphology variant

Description  Variations in the form or composition of a specialized tissue of the reproductive tract that produces the male or female gametes compared to control (Wormatlas).

193 RNAi

WormBase ID
WBRNAi00085473
WBRNAi00085408
WBRNAi00085472
WBRNAi00085474
WBRNAi00085670
WBRNAi00085431
WBRNAi00085576
WBRNAi00085384
WBRNAi00085579
WBRNAi00085334
WBRNAi00085660
WBRNAi00085154
WBRNAi00083865
WBRNAi00083867
WBRNAi00083879
WBRNAi00083881
WBRNAi00022897
WBRNAi00075674
WBRNAi00085450
WBRNAi00085568
WBRNAi00070036
WBRNAi00070035
WBRNAi00068301
WBRNAi00065970
WBRNAi00085740
WBRNAi00085615
WBRNAi00083712
WBRNAi00083584
WBRNAi00083600
WBRNAi00085546

22 RNAi Not Observed

WormBase ID
WBRNAi00083386
WBRNAi00092093
WBRNAi00092092
WBRNAi00065938
WBRNAi00083380
WBRNAi00083376
WBRNAi00083379
WBRNAi00083375
WBRNAi00083374
WBRNAi00083377
WBRNAi00083378
WBRNAi00083381
WBRNAi00083383
WBRNAi00083382
WBRNAi00083385
WBRNAi00083384
WBRNAi00083387
WBRNAi00083389
WBRNAi00083388
WBRNAi00083390
WBRNAi00077781
WBRNAi00114529

10 Children

Identifier Name Description
WBPhenotype:0000977 somatic gonad morphology variant Animals exhibit variations in the form, structure or composition of the components of the gonad that are separate from the germline proper compared to control animals.
WBPhenotype:0001357 male gonad morphology variant Variations in the form or composition of a specialized tissue of the reproductive tract that produces the male gametes compared to control (Wormatlas).
WBPhenotype:0001951 pachytene region organization variant Animals exhibit variations from control animals in the organization of the germ cell nuclei in the pachytene stage region of the gonad. In C. elegans the pachytene region begins just proximal to the germline's transition zone, where germ cells coordinately switch into the leptotene/zygotene stage from the premeiosis stage (WormAtlas).
WBPhenotype:0001940 rachis morphology variant Any variation in the form, structure or composition of the nucleus-free core of germ line cytoplasm in the gonad compared to control animals. In the C. elegans germline, nuclei exiting mitosis and entering meiosis are arranged along the cortex of the germline, partially enclosed by cellular membrane, forming a nucleus-free core of germline cytoplasm, called the rachis.
WBPhenotype:0001957 gonad small A decrease in size of the specialized tissue of the reproductive tract that produces the male or female gametes compared to control (Wormatlas).
WBPhenotype:0001825 rudimentary gonad Animals have very few or no germline nuclei and gonad arms that are very small or missing.
WBPhenotype:0001979 gonad vesiculated Animals contain small, fluid-filled, anucleate, spherical membrane-bound structures within the gonad.
WBPhenotype:0001950 diplotene region organization variant Animals exhibit variations from control animals in the organization of the germ cell nuclei in the gonad that are in the diplotene stage. In C. elegans the diplotene region follows the pachytene region and occurs just distal to, and coincident with, the loop in the gonad arm. In the diplotene region germ cell compartments become organized into a single file.
WBPhenotype:0001958 gonad degenerate Animals contain a gonad that initially functioned, but subsequently stopped. In hermaphrodites or females there is often the presence old embryos and/or hatched larva, but no young embryos, in the uterus.
WBPhenotype:0001949 diakinesis region organization variant Animals exhibit variations from control animals in the organization of the germ cell nuclei in the gonad that are in the diakinesis stage. In C. elegans the diakinesis region occurs in the proximal gonad arm and is preceded by the diplotene region. In the diakinesis region oocytes arrest until oocyte maturation occurs.

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Parents

Identifier Name Description
WBPhenotype:0000605 reproductive system morphology variant Any variations in the form, structure or composition of a set of interacting or interdependent entities forming the reproductive system, compared to control. The reproductive system is involved in the generation of progeny which contain genetic material inherited from the parents.
WBPhenotype:0002553 organ phenotype A phenotype affecting a particular organ.

52 Phenotype Allele

Public Name
q626
q624
sb56
st89
sy549
tm548
e2006
e1795
bn18
dh6
gk37
nr2009
n1653
bx38
n671
n698
n179
b151
mn150
um3
dv38
dv4
ct109
tm1180
tm1349
e1076
e1047
e1094
e1093
e1095

11 Phenotype Allele Not Observed

Public Name
tm842
tm910
n1792
tm1151
tm2238
tm1139
ct107
ct104
ct115
tm2038
tm3440

1 Synonyms

Name Type
gonad morphology abnormal