WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00025697 Gene Name  Cbr-utp-20
Sequence Name  ? CBG02688 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Down-regulated-in-metastasis protein; Armadillo-type fold; and Down-regulated in metastasis. Is an ortholog of C. elegans utp-20. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG02688.1 CBG02688.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG02688 CBG02688   [unknown]

0 RNAi Result

17 Allele

Public Name
WBVar00107583
WBVar00107582
WBVar00107581
WBVar00107580
WBVar00107586
WBVar00107585
WBVar00107584
WBVar00107572
WBVar00107571
WBVar00107570
WBVar00107579
WBVar00107578
WBVar00107577
WBVar00107576
WBVar00107575
WBVar00107574
WBVar00107573

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-tag-184, GGAAGAATACCGTACTCTGGTTGGATTCATTGCTGCTGCCTGTAGATATGAAATCAAGCA, WBGene00025697   Expr1063828 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term