WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00027490 Gene Name  Cbr-clec-232
Sequence Name  ? CBG04897 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; C-type lectin-like; and C-type lectin fold. Is an ortholog of C. elegans clec-232. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG04897.1 CBG04897.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG04897 CBG04897   [unknown]

0 RNAi Result

12 Allele

Public Name
WBVar00109744
WBVar00109745
WBVar00109746
WBVar00109747
WBVar00109751
WBVar00109752
WBVar00109750
WBVar00109748
WBVar00109749
WBVar00043174
WBVar00043169
WBVar00043179

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-clec-232, TGGATAAGTACAAGTGTGAGAGTCCAGAACATCCTAAGACCAGATTGTACGCATGTGGAA, WBGene00027490   Expr1061289 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term