WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00041896 Gene Name  CBG23571
Sequence Name  ? CBG23571 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Histidine kinase/HSP90-like ATPase superfamily and Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. Is an ortholog of C. elegans morc-1. In C. elegans, morc-1 is involved in DNA topological change. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG23571.1 CBG23571.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG23571 CBG23571   [unknown]

0 RNAi Result

9 Allele

Public Name
WBVar00033419
WBVar00133118
WBVar00033404
WBVar00033409
WBVar00133116
WBVar00033414
WBVar00133117
WBVar00033399
WBVar00133115

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG23571, TACGGTATCGAGGTCAATAACCGTCAATTTGACGATGGGATCCATTTGTATGTCAATAAT, WBGene00041896   Expr1053522 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term