WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00035424 Gene Name  CBG15088
Sequence Name  ? CBG15088 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domain: DNA/RNA polymerase superfamily. Is an ortholog of C. elegans Y26D4A.9 and ZC53.4. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG15088.1 CBG15088.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG15088 CBG15088   [unknown]

0 RNAi Result

42 Allele

Public Name
WBVar00044912
WBVar00044917
WBVar00044922
WBVar00044927
WBVar00044902
WBVar00044907
WBVar00044872
WBVar00044877
WBVar00044882
WBVar00044887
WBVar00044892
WBVar00044897
WBVar00044837
WBVar00044832
WBVar00044847
WBVar00044842
WBVar00044857
WBVar00044852
WBVar00044867
WBVar00044862
WBVar00044802
WBVar00044807
WBVar00044812
WBVar00044817
WBVar00044827
WBVar00044822
WBVar00044757
WBVar00044752
WBVar00044762
WBVar00044767

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG15088, AATAAGGTTATGTTACCAGGATACTGATAGTTTAATTTATGAAATTGAAACAGAAAATGT, WBGene00035424   Expr1056660 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term