WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00029473 Gene Name  Cbr-unc-84
Sequence Name  ? CBG07416 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: SUN domain; Galactose-binding-like domain superfamily; and Sad1 / UNC-like C-terminal. Is an ortholog of C. elegans unc-84. In C. elegans, unc-84 is involved in several processes, including egg-laying behavior; nuclear migration along microtubule; and vulval development. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG07416.1 CBG07416.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG07416 CBG07416   [unknown]

0 RNAi Result

19 Allele

Public Name
WBVar00045769
WBVar00045774
WBVar00045779
WBVar00045784
WBVar00045789
WBVar00045794
WBVar00112301
WBVar00112300
WBVar00112291
WBVar00112290
WBVar00112295
WBVar00112294
WBVar00112293
WBVar00112292
WBVar00112299
WBVar00112298
WBVar00112297
WBVar00112296
sy5506

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-unc-84, ACATTGCAGTAGAGCTGTCGCATTTCATTGATGTATCCAGTATTAGCTACGAACACATTG, WBGene00029473   Expr1066689 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term