WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Phenotype : WBPhenotype:0001348 chromosome morphology variant

Description  Variations in the form or composition of a structure in the cell nucleus which contains the genetic material encoded as DNA and surrounded by histone proteins and other regulatory elements compared to control. In C. elegans the normal cell contains 5 pairs of 'autosomes' and one or two X chromosomes (Wormatlas).

31 RNAi

WormBase ID
WBRNAi00082041
WBRNAi00082040
WBRNAi00082043
WBRNAi00082042
WBRNAi00081205
WBRNAi00081206
WBRNAi00062564
WBRNAi00062855
WBRNAi00092468
WBRNAi00092469
WBRNAi00103808
WBRNAi00081545
WBRNAi00082132
WBRNAi00063732
WBRNAi00062947
WBRNAi00087467
WBRNAi00062945
WBRNAi00062946
WBRNAi00062948
WBRNAi00062949
WBRNAi00062950
WBRNAi00076017
WBRNAi00116019
WBRNAi00063731
WBRNAi00092467
WBRNAi00116017
WBRNAi00084889
WBRNAi00082137
WBRNAi00116018
WBRNAi00114455

12 RNAi Not Observed

WormBase ID
WBRNAi00098304
WBRNAi00098303
WBRNAi00098306
WBRNAi00098305
WBRNAi00084890
WBRNAi00081546
WBRNAi00116021
WBRNAi00116020
WBRNAi00116022
WBRNAi00082133
WBRNAi00084891
WBRNAi00082134

5 Children

Identifier Name Description
WBPhenotype:0002161 mitotic chromatin remodeling variant Animals exhibit variations from controls in the organization of chromatin, including in relation to associated complexes, that occur during the mitotic cell division cycle.
WBPhenotype:0001910 kinetochore organization variant Animals exhibit variations in the assembly, arrangement, orientation, or disassembly of the kinetochore, a multisubunit protein complex on chromosomes where the spindle fibers attach during cell division to pull the chromosomes apart.
WBPhenotype:0002542 intranuclear chromatin localization variant Cells exhibit specific regions of chromatin (e.g. an integrated array reporter) that localize to different regions within the nucleus, compared to controls.
WBPhenotype:0001674 telomere morphology variant Animals exhibit variations in the sequence or organization of the components of the terminal region of its chromosome, (i.e. telomere, which serves to stabilize the chromosome) compared to control.
WBPhenotype:0002632 chromatin accessibility abnormal Animals exhibit cells with an abnormal degree of chromatin accessibility, compared to controls, detected using techniques such as ATAC-seq (Assay for Transposase-Accessible Chromatin using sequencing).

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Parents

Identifier Name Description
WBPhenotype:0001028 nuclear appearance variant The morphological appearance of nuclei differs from control animals.

9 Phenotype Allele

Public Name
tm574
e1996
y228
e428
tm1821
ok434
ok2204
ok3124
n4600

1 Phenotype Allele Not Observed

Public Name
me4

1 Synonyms

Name Type
chromosome morphology abnormal