WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00034480 Gene Name  CBG13771
Sequence Name  ? CBG13771 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Selenoprotein SelK/SelG and Selenoprotein SelK_SelG. Is an ortholog of C. elegans Y41E3.8. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG13771.1 CBG13771.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG13771 CBG13771   [unknown]

0 RNAi Result

26 Allele

Public Name
WBVar00046619
WBVar00017024
WBVar00017019
WBVar00017014
WBVar00017009
WBVar00017004
WBVar00017044
WBVar00017049
WBVar00017034
WBVar00017039
WBVar00017029
WBVar00120315
WBVar00120316
WBVar00120317
WBVar00120318
WBVar00120319
WBVar00120320
WBVar00120321
WBVar00120322
WBVar00120323
WBVar00120324
WBVar00016999
WBVar00016994
WBVar00016989
WBVar00016984
WBVar00016979

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG13771, CAAAATCGTAACAGCAACCATCAGGACTACCGTAATATCGTCCGAGGGGGCGGAGTCAAC, WBGene00034480   Expr1063291 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term