WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00036178 Gene Name  Cbr-fln-2
Sequence Name  ? CBG16145 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Immunoglobulin E-set; Immunoglobulin-like fold; Filamin/ABP280 repeat-like; and Filamin/ABP280 repeat. Is an ortholog of C. elegans fln-2. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG16145d.1 CBG16145d.1   [unknown]
Transcript:CBG16145b.1 CBG16145b.1   [unknown]
Transcript:CBG16145c.1 CBG16145c.1   [unknown]
Transcript:CBG16145a.1 CBG16145a.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG16145b CBG16145b   [unknown]
CDS:CBG16145a CBG16145a   [unknown]
CDS:CBG16145d CBG16145d   [unknown]
CDS:CBG16145c CBG16145c   [unknown]

0 RNAi Result

56 Allele

Public Name
WBVar00047807
WBVar00047802
WBVar00047817
WBVar00047812
WBVar00047872
WBVar00047862
WBVar00047867
WBVar00047877
WBVar00047827
WBVar00047822
WBVar00047847
WBVar00047852
WBVar00047857
WBVar00047792
WBVar00047787
WBVar00047742
WBVar00047747
WBVar00047752
WBVar00047757
WBVar00047772
WBVar00047767
WBVar00047782
WBVar00047777
WBVar00050672
WBVar00055204
WBVar00055209
WBVar00055179
WBVar00055184
WBVar00055169
WBVar00055174

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-fln-2.1, GCGTTTCAAGCCCATACGGATCTGTTCCCCCACCAACCAAACATAAAGGACGCAATCATT, WBGene00036177   Expr1066707 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term