WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00038920 Gene Name  CBG19750
Sequence Name  ? CBG19750 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Polysaccharide biosynthesis; Polysaccharide biosynthesis domain; Protein PBDC1, metazoa/fungi; and PBDC1-like domain superfamily. Is an ortholog of C. elegans Y54E5A.5. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG19750.2 CBG19750.2   [unknown]
Transcript:CBG19750.1 CBG19750.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG19750 CBG19750   [unknown]

0 RNAi Result

2 Allele

Public Name
WBVar00001199
WBVar00028344

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG19750, GGAGATGGCGAGAAACGTGGAAGGTGTCAATGAGAAGAACAAGGCCTCCTATACGGCAAG, WBGene00038920   Expr1068907 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term