WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00027913 Gene Name  Cbr-blos-2
Sequence Name  ? CBG05468 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Biogenesis of lysosome-related organelles complex-1, subunit 2 and Biogenesis of lysosome-related organelles complex-1 subunit 2. Is an ortholog of C. elegans blos-2. In C. elegans, blos-2 is involved in endosomal transport. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG05468.1 CBG05468.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG05468 CBG05468   [unknown]

0 RNAi Result

10 Allele

Public Name
WBVar00005202
WBVar00005237
WBVar00005242
WBVar00005247
WBVar00005227
WBVar00005232
WBVar00005217
WBVar00005222
WBVar00005207
WBVar00005212

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG05468, GATGCAATGGATGAGAGTACTCGTAGATTGGAGGAAGCGACAGCAGTGTTGGAGAATTAT, WBGene00027913   Expr1066720 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term