WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00027733 Gene Name  CBG05224
Sequence Name  ? CBG05224 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Protein of unknown function (DUF229); Alkaline-phosphatase-like, core domain superfamily; and Protein of unknown function DUF229. Is an ortholog of C. elegans K03A11.4. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG05224.1 CBG05224.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG05224 CBG05224   [unknown]

0 RNAi Result

30 Allele

Public Name
WBVar00004867
WBVar00004872
WBVar00004862
WBVar00004877
WBVar00004882
WBVar00050872
WBVar00050877
WBVar00050847
WBVar00050842
WBVar00050832
WBVar00050837
WBVar00050867
WBVar00050862
WBVar00050857
WBVar00050852
WBVar00050802
WBVar00050807
WBVar00050822
WBVar00050827
WBVar00050812
WBVar00050817
WBVar00050762
WBVar00050757
WBVar00050752
WBVar00050782
WBVar00050787
WBVar00050777
WBVar00050747
WBVar00050742
WBVar00050737

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG05224, GGGTATGGTGGAACGGAGTAACAGATATGGCAAGACTGCTGATTGCATAAAGTCGGAGTA, WBGene00027733   Expr1068060 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term