WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00033536 Gene Name  CBG12618
Sequence Name  ? CBG12618 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: VAD1 Analog of StAR-related lipid transfer domain; Membrane-anchored lipid-binding protein Ysp2/Lam4-like; and VASt domain. Is an ortholog of C. elegans ZC328.3. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG12618b.1 CBG12618b.1   [unknown]
Transcript:CBG12618a.1 CBG12618a.1   [unknown]
Transcript:CBG12618c.1 CBG12618c.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG12618c CBG12618c   [unknown]
CDS:CBG12618b CBG12618b   [unknown]
CDS:CBG12618a CBG12618a   [unknown]

0 RNAi Result

15 Allele

Public Name
WBVar00008879
WBVar00118718
WBVar00118717
WBVar00118719
WBVar00118716
WBVar00118721
WBVar00118720
WBVar00118723
WBVar00118722
WBVar00118729
WBVar00118728
WBVar00118725
WBVar00118724
WBVar00118727
WBVar00118726

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG12618, GTATGGGGTGTTGTGAAGAACTTCATCGAGAAACCAACCTACAGTGCATTGGAGGAACAT, WBGene00033536   Expr1055529 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term