WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00029561 Gene Name  Cbr-rbc-1
Sequence Name  ? CBG07562 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: RAVE protein 1 C terminal; WD40/YVTN repeat-like-containing domain superfamily; WD40 repeat; RAVE complex protein Rav1 C-terminal; WD domain, G-beta repeat; and WD40-repeat-containing domain superfamily. Is an ortholog of C. elegans rbc-1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG07562b.1 CBG07562b.1   [unknown]
Transcript:CBG07562a.1 CBG07562a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG07562b CBG07562b   [unknown]
CDS:CBG07562a CBG07562a   [unknown]

0 RNAi Result

2 Allele

Public Name
WBVar00008307
WBVar00008302

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-rbc-1, GCCAATCGTCTGTCCAAGGAGTCCAACAACTTTTCATCGATCAAAACATGCGCCTCTTCT, WBGene00029561   Expr1065497 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term