WormMine: Gene WBGene00030172

• WormBase Gene ID: WBGene00030172
• Gene Name: CBG08368
• Sequence Name: CBG08368
• Organism: Caenorhabditis briggsae
• Automated Description: Is affected by Cbr-htz-1 based on RNA-seq studies. Is predicted to encode a protein with the following domains: Pyridoxal-phosphate dependent enzyme and Tryptophan synthase beta subunit-like PLP-dependent enzyme. Is an ortholog of C. elegans F13B12.4.
• Biotype: SO:0001217
• Genetic Position: :±

1 Organism

• Name: Caenorhabditis briggsae
• Taxon Id: 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:CBG08368.1	CBG08368.1		[unknown]

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:CBG08368	CBG08368		[unknown]

0 RNAi Result

3 Allele

• WBVar00009364
• WBVar00009354
• WBVar00009359

0 Chromosome

0 Chromosome Location

1 Data Sets

• WormBaseAcedbConverter

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly decreased expression in Cbr-htz-1(gu167) comparing to in AF16.	DESeq2, FDR < 0.05.	WBPaper00059178:Cbr-htz-1(gu167)_downregulated

1 Expression Patterns

• Primary Identifier: Expr1059812
• Remark: CBG08368, GTTCGGAGGTGTTGAGGGCATGGAATGTTGGAAGAAACTCATTCAGGAATCAATTGACAC, WBGene00030172
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term