WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00032074 Gene Name  CBG10800
Sequence Name  ? CBG10800 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domain: Fukutin-related. Is an ortholog of C. elegans T07D3.4. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG10800a.1 CBG10800a.1   [unknown]
Transcript:CBG10800b.1 CBG10800b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG10800a CBG10800a   [unknown]
CDS:CBG10800b CBG10800b   [unknown]

0 RNAi Result

5 Allele

Public Name
WBVar00116217
WBVar00116218
WBVar00116219
WBVar00116220
WBVar00116221

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG10800, CGAATACGGTCCAGAATGGAGGAAAGATCATCCGTCGTCTGTTTACACATGGAATAAATC, WBGene00032074   Expr1054549 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term