WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00032096 Gene Name  Cbr-mat-1
Sequence Name  ? CBG10827 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Anaphase-promoting complex, cyclosome, subunit 3; Tetratricopeptide repeat; and Tetratricopeptide-like helical domain superfamily. Is an ortholog of C. elegans mat-1. In C. elegans, mat-1 is involved in asymmetric cell division; cortical granule exocytosis; and polarity specification of anterior/posterior axis. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG10827.1 CBG10827.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG10827 CBG10827   [unknown]

0 RNAi Result

5 Allele

Public Name
WBVar00116234
WBVar00116235
WBVar00116231
WBVar00116232
WBVar00116233

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-mat-1, TTCATCGAAGAATGGGAAACACACACTTGGCTCTATTGAGCTACAGTTGGGCGGCTGAGC, WBGene00032096   Expr1059979 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term