WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00032941 Gene Name  CBG11908
Sequence Name  ? CBG11908 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Nascent polypeptide-associated complex subunit alpha-like, UBA domain and HYPK UBA domain. Is an ortholog of C. elegans F13G3.10. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG11908b.1 CBG11908b.1   [unknown]
Transcript:CBG11908a.1 CBG11908a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG11908b CBG11908b   [unknown]
CDS:CBG11908a CBG11908a   [unknown]

0 RNAi Result

2 Allele

Public Name
WBVar00118041
WBVar00015779

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG11908, GTGATGAAGGAATTGGAGCTTCCAGAAGGCACCGTCCGTGCCAAACTCATCGAAACCAAC, WBGene00032941   Expr1057152 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term