WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00025052 Gene Name  CBG01880
Sequence Name  ? CBG01880 Organism  Caenorhabditis briggsae
Automated Description  Is an ortholog of C. elegans C16H3.3. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG01880a.1 CBG01880a.1   [unknown]
Transcript:CBG01880b.1 CBG01880b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG01880b CBG01880b   [unknown]
CDS:CBG01880a CBG01880a   [unknown]

0 RNAi Result

2 Allele

Public Name
WBVar00053959
WBVar00053964

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG01880, CTGTTCGCTTTGATTTCGCAATACAAGAAGAGATTTGCAGTGGAGAACCCAGTCAATCTG, WBGene00025052   Expr1054425 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term