WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00039186 Gene Name  Cbr-sql-1
Sequence Name  ? CBG20118 Organism  Caenorhabditis briggsae
Automated Description  Is an ortholog of C. elegans sql-1. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG20118.1 CBG20118.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG20118 CBG20118   [unknown]

0 RNAi Result

12 Allele

Public Name
WBVar00054754
WBVar00054759
WBVar00054744
WBVar00054749
WBVar00054739
WBVar00128252
WBVar00128251
WBVar00128250
WBVar00128256
WBVar00128255
WBVar00128254
WBVar00128253

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG20118, GAGAATCAAATCGAAGAGCTGCGATCGCCGAAGAAGCCCACCGACTCGTACCGTATCGAT, WBGene00039186   Expr1069868 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term