WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00034541 Gene Name  Cbr-srt-45
Sequence Name  ? CBG13847 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: 7TM GPCR, serpentine receptor class t (Srt) and Serpentine type 7TM GPCR chemoreceptor Srt. Is an ortholog of C. elegans srt-45. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG13847.1 CBG13847.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG13847 CBG13847   [unknown]

0 RNAi Result

13 Allele

Public Name
WBVar00057839
WBVar00057834
WBVar00057859
WBVar00057854
WBVar00057849
WBVar00057844
WBVar00057869
WBVar00057864
WBVar00120354
WBVar00120355
WBVar00120356
WBVar00120357
WBVar00026374

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-srt-45, AAATCTGTTGGGCATGCAATCATGCATGTCCGGCACTCATTTATGTCACGATGAATGACA, WBGene00034541   Expr1068939 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term