WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00024682 Gene Name  Cbr-pid-5
Sequence Name  ? CBG01441 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Creatinase/Prolidase N-terminal domain; Creatinase, N-terminal; Creatinase/Aminopeptidase P/Spt16, N-terminal; Peptidase M24; C-terminal region of peptidase_M24; Peptidase M24, C-terminal domain; Metallopeptidase family M24; and Creatinase/aminopeptidase-like. Is an ortholog of C. elegans pid-5. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG01441.1 CBG01441.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG01441 CBG01441   [unknown]

0 RNAi Result

25 Allele

Public Name
WBVar00067901
WBVar00067966
WBVar00067971
WBVar00067906
WBVar00067911
WBVar00067976
WBVar00067981
WBVar00067916
WBVar00067921
WBVar00067986
WBVar00067991
WBVar00067926
WBVar00067931
WBVar00067996
WBVar00068001
WBVar00067936
WBVar00067941
WBVar00068006
WBVar00067946
WBVar00019244
WBVar00067951
WBVar00067891
WBVar00067956
WBVar00067961
WBVar00067896

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG01440, CTAACCCTCGTCCCGATCCAAACATCGTTCCTTGTCAAGAAACTCCTCCAACCGGAAGAC, WBGene00024681   Expr1064788 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG01441, AATTCATCAATAATCTTCATCACTACAAAACGATCGACGGTGGAAGTGGACATCGTGTCG, WBGene00024682   Expr1051852 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term