WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00023791 Gene Name  CBG00399
Sequence Name  ? CBG00399 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. Is an ortholog of C. elegans clec-198. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG00399.1 CBG00399.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG00399 CBG00399   [unknown]

0 RNAi Result

18 Allele

Public Name
WBVar00062138
WBVar00062108
WBVar00062173
WBVar00062143
WBVar00062113
WBVar00062148
WBVar00062118
WBVar00062088
WBVar00062153
WBVar00062123
WBVar00062093
WBVar00062158
WBVar00062128
WBVar00062098
WBVar00062163
WBVar00062133
WBVar00062103
WBVar00062168

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG00399, GAATACGATGAATTGCACTATATTGATGGATACGTAGCTGGACAGTGGGATGATATGATA, WBGene00023791   Expr1069168 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term