WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00036721 Gene Name  CBG16926
Sequence Name  ? CBG16926 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domain: GM2-AP, lipid-recognition domain superfamily. Is an ortholog of C. elegans C05E7.2. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG16926.1 CBG16926.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG16926 CBG16926   [unknown]

0 RNAi Result

7 Allele

Public Name
WBVar00015609
WBVar00124384
WBVar00124387
WBVar00124388
WBVar00124385
WBVar00124386
WBVar00124389

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG16926, GAATCTTTGCCACTGTCTACGTTTTCGACTCTGACGTCAGTAAACAAATGTCAACCCAAA, WBGene00036721   Expr1060629 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term