WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00034992 Gene Name  Cbr-glit-1
Sequence Name  ? CBG14528 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Carboxylesterase family; Carboxylesterase, type B; and Alpha/Beta hydrolase fold. Is an ortholog of C. elegans glit-1. In C. elegans, glit-1 is involved in cellular response to paraquat and negative regulation of response to oxidative stress. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG14528.1 CBG14528.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG14528 CBG14528   [unknown]

0 RNAi Result

10 Allele

Public Name
WBVar00121480
WBVar00121481
WBVar00121474
WBVar00121475
WBVar00121476
WBVar00121477
WBVar00121478
WBVar00121479
WBVar00121472
WBVar00121473

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-glit-1, CAACAACACTATAAAGCTTGGACGTTACGTTGGTTGTTCTGAAACCGTCCCACAGAATGT, WBGene00034992   Expr1052361 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term