WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00039439 Gene Name  Cbr-mks-6
Sequence Name  ? CBG20463 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: C2 domain; CC2D2A N-terminal C2 domain; C2 domain superfamily; and CC2D2A, N-terminal, C2 domain. Is an ortholog of C. elegans mks-6. In C. elegans, mks-6 is involved in non-motile cilium assembly and protein localization to ciliary transition zone. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG20463.1 CBG20463.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG20463 CBG20463   [unknown]

0 RNAi Result

1 Allele

Public Name
WBVar00128691

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG20463, GAATGTCGTCGACTTTTTTGCGCATGTTATTCAAATTGACGTAGCCTTGGCAGTTTTGAA, WBGene00039439   Expr1058042 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term