WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00039184 Gene Name  CBG20114
Sequence Name  ? CBG20114 Organism  Caenorhabditis briggsae
Automated Description  Is an ortholog of C. elegans lam-1. In C. elegans, lam-1 is involved in pharynx development and positive regulation of locomotion. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG20114.1 CBG20114.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG20114 CBG20114   [unknown]

0 RNAi Result

24 Allele

Public Name
WBVar00128223
WBVar00128222
WBVar00128221
WBVar00128220
WBVar00128227
WBVar00128226
WBVar00128225
WBVar00128224
WBVar00128241
WBVar00128240
WBVar00128243
WBVar00128242
WBVar00128239
WBVar00128230
WBVar00128234
WBVar00128233
WBVar00128232
WBVar00128231
WBVar00128238
WBVar00128237
WBVar00128236
WBVar00128235
WBVar00128229
WBVar00128228

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG20114, GGAGTCAAGGTGGAATATCTCCAGATTTCGGAATCAGCTAAGAATGCGTTGACTACTGTA, WBGene00039184   Expr1054241 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term