WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00028488 Gene Name  Cbr-ech-2
Sequence Name  ? CBG06178 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Enoyl-CoA hydratase/isomerase; ClpP/crotonase-like domain superfamily; and Enoyl-CoA hydratase, C-terminal. Is an ortholog of C. elegans ech-2. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG06178b.1 CBG06178b.1   [unknown]
Transcript:CBG06178a.1 CBG06178a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG06178a CBG06178a   [unknown]
CDS:CBG06178b CBG06178b   [unknown]

0 RNAi Result

3 Allele

Public Name
WBVar00006412
WBVar00006417
WBVar00006422

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-ech-2, AAGATTGTCAAGAAGGAATCTCGGCGTTCATTGGAAAGCGTCATCCAGAGTTCGAGCACT, WBGene00028488   Expr1062397 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term