WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00029623 Gene Name  CBG07646
Sequence Name  ? CBG07646 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Endoplasmic reticulum vesicle transporter; Endoplasmic reticulum vesicle transporter, C-terminal; Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC); and Endoplasmic reticulum vesicle transporter, N-terminal. Is an ortholog of C. elegans ergi-2. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG07646.1 CBG07646.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG07646 CBG07646   [unknown]

0 RNAi Result

9 Allele

Public Name
WBVar00112666
WBVar00112665
WBVar00112664
WBVar00112669
WBVar00112668
WBVar00112667
WBVar00112672
WBVar00112671
WBVar00112670

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG07646, TTTGTTCGATCCTTGGAGGTGTCTACGCCACAAGCACTATTATCAACAACATTGTTCAAT, WBGene00029623   Expr1068219 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term