WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00031917 Gene Name  Cbr-prmt-6
Sequence Name  ? CBG10553 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: S-adenosyl-L-methionine-dependent methyltransferase; Methyltransferase domain 25; and Methyltransferase domain. Is an ortholog of C. elegans prmt-6. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG10553.1 CBG10553.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG10553 CBG10553   [unknown]

0 RNAi Result

16 Allele

Public Name
WBVar00115945
WBVar00115946
WBVar00115947
WBVar00115948
WBVar00115941
WBVar00115942
WBVar00115943
WBVar00115944
WBVar00115949
WBVar00115950
WBVar00115951
WBVar00115939
WBVar00115940
WBVar00115952
WBVar00115953
WBVar00115954

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-prmt-6, TAGAAGGCGTCAACCCTCCAGAAGACATGGGATGGAAATTGGGGGCTCAGATTCAAAAGA, WBGene00031917   Expr1054623 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term