WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00033825 Gene Name  Cbr-cpna-2
Sequence Name  ? CBG12974 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: von Willebrand factor, type A; Copine; and Copine, C-terminal. Is an ortholog of C. elegans cpna-2. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG12974.1 CBG12974.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG12974 CBG12974   [unknown]

0 RNAi Result

10 Allele

Public Name
WBVar00119259
WBVar00119257
WBVar00119258
WBVar00119260
WBVar00026524
WBVar00026509
WBVar00026529
WBVar00026514
WBVar00026534
WBVar00026519

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG12974, TCGTTGAGACCGAGCAGGCTTCTGAAGTCAAGATGAGAGAGAAAGGCGAAGAGCGTAGAA, WBGene00033825   Expr1059184 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG12976, TTCAAGCAAGTCGCCGAAAGCTGTGCAGTCATGATCAAGAACACTGGAGTAGAGCGTGGA, WBGene00033827   Expr1061050 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cbr-tag-308, TCATTCGGTCAAGTCACGAATACGAGGAAACTCAGAAGACATTGAGACATCGTAGCGCTT, WBGene00033826   Expr1054794 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term