WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00038612 Gene Name  Cbr-sru-38
Sequence Name  ? CBG19377 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: 7TM GPCR, serpentine receptor class u (Sru) and Serpentine type 7TM GPCR chemoreceptor Sru. Is an ortholog of C. elegans sru-38. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG19377.1 CBG19377.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG19377 CBG19377   [unknown]

0 RNAi Result

24 Allele

Public Name
WBVar00057359
WBVar00057364
WBVar00057344
WBVar00057349
WBVar00057354
WBVar00057369
WBVar00057374
WBVar00057319
WBVar00057314
WBVar00057309
WBVar00057304
WBVar00057334
WBVar00057339
WBVar00057324
WBVar00057329
WBVar00057284
WBVar00057289
WBVar00057294
WBVar00057299
WBVar00127413
WBVar00127412
WBVar00127416
WBVar00127415
WBVar00127414

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-sru-38, GTGAACATCGTCTCCTGTTACTTCTACTTGACTCATCCAATTTTCAAACAAGAACCGAAC, WBGene00038612   Expr1067202 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term