WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00030684 Gene Name  CBG09010
Sequence Name  ? CBG09010 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domain: Putative G-protein coupled receptor, Chromadorea. Is an ortholog of C. elegans B0244.10. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

13 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG09010c.1 CBG09010c.1   [unknown]
Transcript:CBG09010b.1 CBG09010b.1   [unknown]
Transcript:CBG09010b.2 CBG09010b.2   [unknown]
Transcript:CBG09010a.2 CBG09010a.2   [unknown]
Transcript:CBG09010a.1 CBG09010a.1   [unknown]
Transcript:CBG09010a.4 CBG09010a.4   [unknown]
Transcript:CBG09010a.3 CBG09010a.3   [unknown]
Transcript:CBG09010a.6 CBG09010a.6   [unknown]
Transcript:CBG09010a.5 CBG09010a.5   [unknown]
Transcript:CBG09010a.8 CBG09010a.8   [unknown]
Transcript:CBG09010a.7 CBG09010a.7   [unknown]
Transcript:CBG09010d.1 CBG09010d.1   [unknown]
Transcript:CBG09010d.2 CBG09010d.2   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG09010d CBG09010d   [unknown]
CDS:CBG09010b CBG09010b   [unknown]
CDS:CBG09010c CBG09010c   [unknown]
CDS:CBG09010a CBG09010a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG09009, AGAATCCAGTGGATCTCGTCTACAATTTGTTATATCATGCGTTATTTTGACACTTTTATG, WBGene00030683   Expr1060260 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG09010, ATCCCTCTTGCCATATTTCAAGCCTCAATTGCCATTCCAGTCAGTATTAAATGCACTGAC, WBGene00030684   Expr1053042 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term