WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00225896 Gene Name  Bm5635
Sequence Name  ? Bm5635 Organism  Brugia malayi
Automated Description  Is predicted to encode a protein with the following domains: Transmembrane Fragile-X-F-associated protein and Transmembrane Fragile-X-F protein. Is an ortholog of C. elegans T07A9.12. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm5635d.1 Bm5635d.1   [unknown]
Transcript:Bm5635c.1 Bm5635c.1   [unknown]
Transcript:Bm5635b.1 Bm5635b.1   [unknown]
Transcript:Bm5635a.1 Bm5635a.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm5635a Bm5635a   [unknown]
CDS:Bm5635c Bm5635c   [unknown]
CDS:Bm5635b Bm5635b   [unknown]
CDS:Bm5635d Bm5635d   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in female B. malayi 120 days after infecting gerbils, comparing to 30 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:upregulated_F120_vs_F30
  Transcripts that showed significantly increased expression in male B. malayi 120 days after infecting gerbils, comparing to female B. malayi 120 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:upregulated_M120_vs_F120

0 Expression Patterns

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term