WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00027066 Gene Name  Cbr-ego-2
Sequence Name  ? CBG04380 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: BRO1 domain superfamily; ALIX V-shaped domain; ALIX V-shaped domain binding to HIV; BRO1-like domain; and BRO1 domain. Is an ortholog of C. elegans ego-2. In C. elegans, ego-2 is involved in positive regulation of Notch signaling pathway and protein localization to basolateral plasma membrane. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG04380a.1 CBG04380a.1   [unknown]
Transcript:CBG04380b.1 CBG04380b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG04380b CBG04380b   [unknown]
CDS:CBG04380a CBG04380a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-ego-2, CACCACCACTCAACCCATCCGACCCACTGAATCAAATCGACGCATTCGGCAGTTTTAAAT, WBGene00027066   Expr1057142 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term