WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00120467 Gene Name  Cjp-igcm-1
Sequence Name  ? CJA01263 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: Immunoglobulin I-set domain; Immunoglobulin I-set; Immunoglobulin subtype; Fibronectin type III; Immunoglobulin-like domain; Immunoglobulin V-set domain; Immunoglobulin-like fold; Immunoglobulin domain; CD80-like C2-set immunoglobulin domain; CD80-like, immunoglobulin C2-set; Immunoglobulin subtype 2; Immunoglobulin-like domain superfamily; and Fibronectin type III superfamily. Is an ortholog of C. elegans igcm-1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA01263a.1 CJA01263a.1   [unknown]
Transcript:CJA01263b.1 CJA01263b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA01263b CJA01263b   [unknown]
CDS:CJA01263a CJA01263a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA01263, TCGAATGAGCCTATTTCCAATGTTCCTAATGGAAGAAAATACAAAGCCAGGTTCTGTTTG, WBGene00120467   Expr1083878 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term