WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00041850 Gene Name  Cbr-atn-1
Sequence Name  ? CBG23504 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Spectrin repeat; Calponin homology (CH) domain; EF-hand domain pair; Calponin homology domain; EF-hand, Ca insensitive; Spectrin/alpha-actinin; Ca2+ insensitive EF hand; and CH domain superfamily. Is an ortholog of C. elegans atn-1. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG23504.1 CBG23504.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG23504 CBG23504   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-atn-1, GAGGAACTGGAACGCGAGTTGCCACGTGATCAAGCTGCTTACTGTATGGCACGAATGGCT, WBGene00041850   Expr1057655 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term